CDS

Accession Number TCMCG017C26328
gbkey CDS
Protein Id OMO69960.1
Location join(3505..3837,4370..5104)
GeneID InterPro:IPR001965
Organism Corchorus olitorius
locus_tag COLO4_28842

Protein

Length 355aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020089.1
Definition Zinc finger, PHD-type [Corchorus olitorius]
Locus_tag COLO4_28842

EGGNOG-MAPPER Annotation

COG_category O
Description PHD-finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
KEGG_ko ko:K17586        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGGCGATTTCTCAAACAAAACCCTCCAAACCCCAACTCTTAAATTCGAACCCGTCATCCTCGACGACCAACGACGACGACGATCAATCAACGGCCGTGACTCTGATGACTTCCGCTGCGGCTTATGCTTCTCAGACCGTGGAAAACCTGCTCTCAGGGGCACAATCGACTGCTGCGACCATACCTTCTGCTTCGTTTGTATCGTGAGGTGGGCTAAGGCGGAGTCTTTTTGCCCTCGCTGCAAGCTCCGCTTCACCACAATCTATGGACCGTCGAAGAACGCCGTCTTTGCCTCCAAACGCCCCTTAAACCCTCCTGAAGGGAATCAGGCTTGCAATGTCTTGAGAGCTGCAACATCTGGGCCTCTGATTCCTTGTGAAGACATTAGATGCAGTGTGTGCCATGGTACTGCTAATGAAAGTCGCTGTCGACTGCTTTGTGATATCTGTGACTCAGCTGTTCATACTTACTGCGTCGGCTTCCATGCTGCAACTGTACTTGACAGTACTTGGTTTTGTTATAACTGTGCTCTGTCTAGGTCTAGCCATGATAAAACTGAAGTTCATACTGCTGTTGGCAATCAAAAGACATCTAGAAACTTTGATGGCAAATTACCTGTGGAGAAGAGTACTCTGGTTTTTGGTACTCCAAGGAATTCAATTGTCCCTGTGAGTGGAGATCATAATTCAAGGTTTTCTTCACGCCCTAACTATTGGTCACCTCCAATTCTTCCAGCTGGAAGGAGAAGTATGCATAAAGCCGATGGTCCAGTTGAAAGAAGTCATCATCGACTGTCATCAGCTTCTCTTTGTGGCAAAAGGAGTGGGAAGGGTAGTACCAAGGCAAGGGTAGCAGAACTAGAAAAGTTGGTGCAAAGTCTCCTAAAGCAGATAAAGGATGAACAGCAGAAAAGGGAGCGAATTGAGAGAGGCATCCATGATAGAATTAAACAACAGATTGACGAGAAATTTCAACAGCATTTTGATCAATTTCTTGCCATGCACATGAATCAAATTTTGTTAGAAGTGCATTCAGCAAAATGGTCTTCCAAGCCACCAGTTTGA
Protein:  
MAGDFSNKTLQTPTLKFEPVILDDQRRRRSINGRDSDDFRCGLCFSDRGKPALRGTIDCCDHTFCFVCIVRWAKAESFCPRCKLRFTTIYGPSKNAVFASKRPLNPPEGNQACNVLRAATSGPLIPCEDIRCSVCHGTANESRCRLLCDICDSAVHTYCVGFHAATVLDSTWFCYNCALSRSSHDKTEVHTAVGNQKTSRNFDGKLPVEKSTLVFGTPRNSIVPVSGDHNSRFSSRPNYWSPPILPAGRRSMHKADGPVERSHHRLSSASLCGKRSGKGSTKARVAELEKLVQSLLKQIKDEQQKRERIERGIHDRIKQQIDEKFQQHFDQFLAMHMNQILLEVHSAKWSSKPPV